<p>Indicator values were calculated using the abundance distribution of OTUs at the 97% identity cutoff. Boldface highlights the taxa that are indicators for noma. The abundance ranges for taxa with high indicator species values are shown in box plots in <a href="http://www.plosntds.org/article/info:doi/10.1371/journal.pntd.0003240#pntd-0003240-g004" target="_blank">Figure 4A</a>. Results with all groups in “Other” being treated separately are shown in <a href="http://www.plosntds.org/article/info:doi/10.1371/journal.pntd.0003240#pntd.0003240.s009" target="_blank">Table S6</a>.</p><p>Indicator species analysis comparing the noma lesion site samples (“Noma” in “Indicator of” column) with the other four health status groups (control, noma hea...
<p>Lines within the box represent the median values of the number of species found within each cover...
<p>(A) Twenty-four species were observed to have average abundance between 0.5% - 19.3% among the NC...
<p>(a) Number of human observation and preserved specimen records of each species. Species are plott...
<p>(A) The relative abundance of the top 4 97% OTUs that indicate the noma lesion samples are shown ...
<p>Taxa indicated in bold are more abundant in noma or both noma and ANG samples compared to the con...
<p>SA plots showing the increase in OTUs detected with the addition of each patient sample. Each bar...
<p>For each of the taxa, we indicate the total number of sequences corresponding to the OTU that rep...
When the log10 of relative abundances is displayed, a pseudo-count equal to the minimal relative abu...
<p>A. Manhattan Plot showing the -log<sub>10</sub> p-values from the two-part statistical test compa...
Results obtained from the indicator species analysis for vegetation belts considered and for each si...
Each dot corresponds to the Best Linear Unbiased Estimator (BLUE) for disease index of one of the 19...
<p>a) Rarefaction curves presenting the relationship between sequencing depth and species richness i...
<p>Significant relationships between the coverage and seedling number of each invader and certain do...
<p>Indicator species of various water masses are shown. Indicator values (IndVal) are shown next to ...
<p>Y-axis was transformed by taking the base ten logarithm of the number of reads plus one. Samples ...
<p>Lines within the box represent the median values of the number of species found within each cover...
<p>(A) Twenty-four species were observed to have average abundance between 0.5% - 19.3% among the NC...
<p>(a) Number of human observation and preserved specimen records of each species. Species are plott...
<p>(A) The relative abundance of the top 4 97% OTUs that indicate the noma lesion samples are shown ...
<p>Taxa indicated in bold are more abundant in noma or both noma and ANG samples compared to the con...
<p>SA plots showing the increase in OTUs detected with the addition of each patient sample. Each bar...
<p>For each of the taxa, we indicate the total number of sequences corresponding to the OTU that rep...
When the log10 of relative abundances is displayed, a pseudo-count equal to the minimal relative abu...
<p>A. Manhattan Plot showing the -log<sub>10</sub> p-values from the two-part statistical test compa...
Results obtained from the indicator species analysis for vegetation belts considered and for each si...
Each dot corresponds to the Best Linear Unbiased Estimator (BLUE) for disease index of one of the 19...
<p>a) Rarefaction curves presenting the relationship between sequencing depth and species richness i...
<p>Significant relationships between the coverage and seedling number of each invader and certain do...
<p>Indicator species of various water masses are shown. Indicator values (IndVal) are shown next to ...
<p>Y-axis was transformed by taking the base ten logarithm of the number of reads plus one. Samples ...
<p>Lines within the box represent the median values of the number of species found within each cover...
<p>(A) Twenty-four species were observed to have average abundance between 0.5% - 19.3% among the NC...
<p>(a) Number of human observation and preserved specimen records of each species. Species are plott...